# Library versions

## Python packages

Python 3.12

<table><thead><tr><th valign="top">Package</th><th valign="top">Latest version tested with the GitBook code</th></tr></thead><tbody><tr><td valign="top">pandas</td><td valign="top">1.5.3</td></tr><tr><td valign="top">matplotlib</td><td valign="top">3.7.2</td></tr><tr><td valign="top">seaborn</td><td valign="top">0.11.2</td></tr><tr><td valign="top">scikit-learn</td><td valign="top">1.2.2</td></tr><tr><td valign="top">statsmodels</td><td valign="top">0.14.0</td></tr><tr><td valign="top">statsmodels</td><td valign="top">0.14.0</td></tr></tbody></table>

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## R libraries (in order of appearance in the GitBook):

R – v4.4.1

RStudio – v2024.04.2

<table><thead><tr><th valign="top">Library</th><th valign="top">Latest version tested with the GitBook code</th></tr></thead><tbody><tr><td valign="top">readxl</td><td valign="top">1.4.3</td></tr><tr><td valign="top">tidyverse</td><td valign="top">2.0.0</td></tr><tr><td valign="top">tidymodels</td><td valign="top">1.2.0</td></tr><tr><td valign="top">magrittr</td><td valign="top">2.0.3</td></tr><tr><td valign="top">tidyr</td><td valign="top">1.3.1</td></tr><tr><td valign="top">DataExplorer</td><td valign="top">0.8.3</td></tr><tr><td valign="top">VIM</td><td valign="top">6.2.2</td></tr><tr><td valign="top">randomForest</td><td valign="top">4.7-1.2</td></tr><tr><td valign="top">recipes</td><td valign="top">1.1.0</td></tr><tr><td valign="top">bestNormalize</td><td valign="top">1.9.1</td></tr><tr><td valign="top">dlookr</td><td valign="top">0.6.2</td></tr><tr><td valign="top">psych</td><td valign="top">2.3.6</td></tr><tr><td valign="top">summarytools</td><td valign="top">1.0.1</td></tr><tr><td valign="top">rstatix</td><td valign="top">0.7.2</td></tr><tr><td valign="top">skimr</td><td valign="top">2.1.5</td></tr><tr><td valign="top">dplyr</td><td valign="top">1.1.3</td></tr><tr><td valign="top">gtsummary</td><td valign="top">2.2.0</td></tr><tr><td valign="top">gt</td><td valign="top">1.0.0</td></tr><tr><td valign="top">ggpubr</td><td valign="top">0.6.0</td></tr><tr><td valign="top">tidyplots</td><td valign="top">0.2.1</td></tr><tr><td valign="top">ggplot2</td><td valign="top">3.5.1</td></tr><tr><td valign="top">ggimage</td><td valign="top">0.3.3</td></tr><tr><td valign="top">plotly</td><td valign="top">4.10.4</td></tr><tr><td valign="top">ggstatsplot</td><td valign="top">0.13.1</td></tr><tr><td valign="top">litteR</td><td valign="top">1.0.0</td></tr><tr><td valign="top">ggpmisc</td><td valign="top">0.6.1</td></tr><tr><td valign="top">ggcorrplot</td><td valign="top">0.1.4.1</td></tr><tr><td valign="top">corrplot</td><td valign="top">0.92</td></tr><tr><td valign="top">RColorBrewer</td><td valign="top">1.1-3</td></tr><tr><td valign="top">ggsci</td><td valign="top">3.2.0</td></tr><tr><td valign="top">wesanderson</td><td valign="top">0.3.7</td></tr><tr><td valign="top">viridis</td><td valign="top">0.6.5</td></tr><tr><td valign="top">reshape</td><td valign="top">0.8.9</td></tr><tr><td valign="top">reshape 2</td><td valign="top">1.4.4</td></tr><tr><td valign="top">colorBlindness</td><td valign="top">0.1.9</td></tr><tr><td valign="top">forcats</td><td valign="top">1.0.0</td></tr><tr><td valign="top">ggthemes</td><td valign="top">5.1.0</td></tr><tr><td valign="top">cowplot</td><td valign="top">1.1.3</td></tr><tr><td valign="top">GGally</td><td valign="top">2.2.1</td></tr><tr><td valign="top">PMCMRplus</td><td valign="top">1.9.12</td></tr><tr><td valign="top">coin</td><td valign="top">1.4-3</td></tr><tr><td valign="top">EnhancedVolcano</td><td valign="top">1.22.0</td></tr><tr><td valign="top">splitstackshape</td><td valign="top">1.4.8</td></tr><tr><td valign="top">mixOmics</td><td valign="top">6.28.0</td></tr><tr><td valign="top">factoextra</td><td valign="top">1.0.7</td></tr><tr><td valign="top">FactoMineR</td><td valign="top">2.11</td></tr><tr><td valign="top">ggrepel</td><td valign="top">0.9.6</td></tr><tr><td valign="top">Rtsne</td><td valign="top">0.17</td></tr><tr><td valign="top">scales</td><td valign="top">1.4.0</td></tr><tr><td valign="top">uwot</td><td valign="top">0.2.3</td></tr><tr><td valign="top">caret</td><td valign="top">7.0-1</td></tr><tr><td valign="top">pROC</td><td valign="top">1.18.5</td></tr><tr><td valign="top">plsmod</td><td valign="top">1.0.0</td></tr><tr><td valign="top">pls</td><td valign="top">2.8-5</td></tr><tr><td valign="top">rsample</td><td valign="top">1.3.0</td></tr><tr><td valign="top">vip</td><td valign="top">0.4.1</td></tr><tr><td valign="top">ropls</td><td valign="top">1.36.0</td></tr><tr><td valign="top">ggtree</td><td valign="top">3.12.0</td></tr><tr><td valign="top">ComplexHeatmap</td><td valign="top">2.20.0</td></tr><tr><td valign="top">circlize</td><td valign="top">0.4.16</td></tr><tr><td valign="top">shiny</td><td valign="top">1.10.0</td></tr><tr><td valign="top">InteractiveComplexHeatmap</td><td valign="top">1.14.0</td></tr><tr><td valign="top">e1071</td><td valign="top">1.7-16</td></tr></tbody></table>

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